Information for motif44


Reverse Opposite:

p-value:1e-3
log p-value:-7.146e+00
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets234.2 +/- 151.4bp
Average Position of motif in Background107.7 +/- 63.9bp
Strand Bias (log2 ratio + to - strand density)3.7
Multiplicity (# of sites on avg that occur together)3.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTCCCGGACGGG
TTCCNGGAAG--

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTCCCGGACGGG
NCTTCCNGGAAGNN

MA0137.3_STAT1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCGGACGGG
TTTCCTGGAAA--

MA0144.2_STAT3/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCGGACGGG
TTTCCCAGAAN--

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTCCCGGACGGG
NTTTCCNGGAAA--

MA0518.1_Stat4/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTCCCGGACGGG
NNNTTTCCTGGAAA--

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCGGACGGG--
TTTCCTGGAAAGNNN

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TTCCCGGACGGG
AGTATTCTCGGTTGC-

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTCCCGGACGGG
ATTTCCNGGAAATN

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTCCCGGACGGG
ATTTCCAAGAA---