Information for motif45


Reverse Opposite:

p-value:1e-2
log p-value:-6.600e+00
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets259.6 +/- 160.4bp
Average Position of motif in Background455.5 +/- 209.8bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0117.1_Mafb/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--ATCAGCCG
NCGTCAGC--

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ATCAGCCG-
NAHCAGCTGD

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ATCAGCCG
--CAGCC-

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATCAGCCG-
BAACAGCTGT

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATCAGCCG
AACAGCTG

PH0016.1_Cux1_1/Jaspar

Match Rank:6
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------ATCAGCCG--
TNAGNTGATCAACCGGT

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATCAGCCG----
AGCAGCTGCTNN

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATCAGCCG-
CAGCAGCTGN

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ATCAGCCG--
--CAGCTGNT

PB0151.1_Myf6_2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATCAGCCG----
AGCAACAGCCGCACC