Information for motif5


Reverse Opposite:

p-value:1e-13
log p-value:-3.078e+01
Information Content per bp:1.840
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif2.80%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets305.7 +/- 253.8bp
Average Position of motif in Background252.1 +/- 217.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGTTGGACCA--
--TTGCAACATN

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGTTGGACCA
GGGCGGGACC-

GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGTTGGACCA
CGTGGGTGGTCC-

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGTTGGACCA-
-ATTGCATCAK

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGTTGGACCA-
-ATTGCATCAT

MA0133.1_BRCA1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGTTGGACCA
GTGTTGN----

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGTTGGACCA-------
CATAAGACCACCATTAC

MA0466.1_CEBPB/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGTTGGACCA-
TATTGCACAAT

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GGTTGGACCA--
NGTAGGTTGGCATNNN

MA0152.1_NFATC2/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGTTGGACCA
---TGGAAAA