Information for motif7


Reverse Opposite:

p-value:1e-13
log p-value:-3.007e+01
Information Content per bp:1.834
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif6.31%
Number of Background Sequences with motif53.8
Percentage of Background Sequences with motif2.16%
Average Position of motif in Targets331.2 +/- 210.9bp
Average Position of motif in Background531.1 +/- 412.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AATACACTAC
SSAATCCACANN

PB0141.1_Isgf3g_2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AATACACTAC--
GCAAAACATTACTA

MA0479.1_FOXH1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AATACACTAC
TCCAATCCACA--

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AATACACTAC--
AATCAATTCAATAATT

PB0171.1_Sox18_2/Jaspar

Match Rank:5
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------AATACACTAC
NNNNTGAATTCANNNC

PH0038.1_Hlx/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AATACACTAC-
CCATAATTAATTACA

MA0040.1_Foxq1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AATACACTAC-
AATAAACAATN

Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AATACACTAC
TAATCAATTA-

MA0032.1_FOXC1/Jaspar

Match Rank:9
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:AATACACTAC-----
-------TACTNNNN

PB0106.1_Arid5a_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AATACACTAC--
CATACAATACGAAATAA