Information for motif8


Reverse Opposite:

p-value:1e-12
log p-value:-2.890e+01
Information Content per bp:1.898
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets371.4 +/- 290.5bp
Average Position of motif in Background492.8 +/- 499.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTAAGGCAGG---
--AAGGCAAGTGT

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTAAGGCAGG-
GCTGASTCAGCA

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTAAGGCAGG
-TAATCCCN-

MA0132.1_Pdx1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTAAGGCAGG
CTAATT----

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTAAGGCAGG
TGCTGAGTCA--

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTAAGGCAGG
CTAATKGV--

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CTAAGGCAGG----
----NNCAGGTGNN

MA0003.2_TFAP2A/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTAAGGCAGG-
TGCCCTGAGGCANTN

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTAAGGCAGG
GCTAATCC---

MA0591.1_Bach1::Mafk/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CTAAGGCAGG--
NTGCTGAGTCATCCN