Information for motif47


Reverse Opposite:

p-value:1e-16
log p-value:-3.783e+01
Information Content per bp:1.963
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets439.0 +/- 339.6bp
Average Position of motif in Background521.4 +/- 355.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:forward strand
Alignment:ACATGACC
-CATGAC-

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:ACATGACC-
---TGACCT

MA0093.2_USF1/Jaspar

Match Rank:3
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---ACATGACC
GCCACGTGACC

E-box(HLH)/Promoter/Homer

Match Rank:4
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--ACATGACC--
TCACGTGACCGG

MA0067.1_Pax2/Jaspar

Match Rank:5
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:ACATGACC
NCGTGACN

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ACATGACC-------
NNCNTGACCCCGCTCT

PB0057.1_Rxra_1/Jaspar

Match Rank:7
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--ACATGACC-------
TGTCGTGACCCCTTAAT

MA0071.1_RORA_1/Jaspar

Match Rank:8
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:ACATGACC-----
---TGACCTTGAT

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ACATGACC-------
NNNNTGACCTTTNNNN

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ACATGACC-------
NNNNTGACCCGGCGCG