Information for motif1


Reverse Opposite:

p-value:1e-19
log p-value:-4.448e+01
Information Content per bp:1.796
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets296.8 +/- 278.0bp
Average Position of motif in Background384.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0081.1_SPIB/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TAGTGGTAGAAC
-AGAGGAA----

MA0057.1_MZF1_5-13/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TAGTGGTAGAAC
GGAGGGGGAA---

PB0128.1_Gcm1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------TAGTGGTAGAAC
TGCGCATAGGGGAGGAG-

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TAGTGGTAGAAC
-AATGGAAAAT-

MA0122.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TAGTGGTAGAAC
TTAAGTGGA-----

MA0152.1_NFATC2/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TAGTGGTAGAAC
---TGGAAAA--

PB0058.1_Sfpi1_1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TAGTGGTAGAAC
TTAAGAGGAAGTTA

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TAGTGGTAGAAC
-AGAGGAAGTG-

MF0001.1_ETS_class/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TAGTGGTAGAAC
-ACCGGAAG---

MA0130.1_ZNF354C/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TAGTGGTAGAAC
--GTGGAT----