Information for motif11


Reverse Opposite:

p-value:1e-10
log p-value:-2.521e+01
Information Content per bp:1.530
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets361.8 +/- 292.7bp
Average Position of motif in Background434.6 +/- 140.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------ATCCTAACTTTG
GATAACATCCTAGTAG--

MA0029.1_Mecom/Jaspar

Match Rank:2
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----ATCCTAACTTTG
TNTTATCTTATCTT--

MA0442.1_SOX10/Jaspar

Match Rank:3
Score:0.53
Offset:7
Orientation:forward strand
Alignment:ATCCTAACTTTG-
-------CTTTGT

PB0161.1_Rxra_2/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ATCCTAACTTTG---
NNNNCAACCTTCGNGA

MA0114.2_HNF4A/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ATCCTAACTTTG-----
--CTGGACTTTGGACTC

MA0141.2_Esrrb/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:ATCCTAACTTTG----
----TGACCTTGANNN

PB0115.1_Ehf_2/Jaspar

Match Rank:7
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------ATCCTAACTTTG
TAGTATTTCCGATCTT--

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:ATCCTAACTTTG--
----TGACCTTGAV

MA0484.1_HNF4G/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:ATCCTAACTTTG------
---TGGACTTTGNNCTCN

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---ATCCTAACTTTG--
AACACCAAAACAAAGGA