Information for motif14


Reverse Opposite:

p-value:1e-10
log p-value:-2.486e+01
Information Content per bp:1.740
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif5.01%
Number of Background Sequences with motif38.7
Percentage of Background Sequences with motif1.69%
Average Position of motif in Targets361.6 +/- 293.2bp
Average Position of motif in Background549.1 +/- 445.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0592.1_ESRRA/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GCCATGGTCAGA
-CCAAGGTCACA

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GCCATGGTCAGA
-CAAAGGTCAG-

MA0141.2_Esrrb/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCCATGGTCAGA
AGCTCAAGGTCA--

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCCATGGTCAGA
BTCAAGGTCA--

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCCATGGTCAGA
-TCAAGGTCAN-

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCCATGGTCAGA
NGTTGCCATGGCAA--

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCATGGTCAGA
NTCAAGGTCA--

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCCATGGTCAGA---
TATTCAAGGTCATGCGA

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCCATGGTCAGA
GGTTGCCATGGCAA--

MA0512.1_Rxra/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCCATGGTCAGA
-CAAAGGTCAGA