Information for motif17


Reverse Opposite:

p-value:1e-10
log p-value:-2.385e+01
Information Content per bp:1.580
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets396.2 +/- 272.1bp
Average Position of motif in Background761.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GMGGACCAGT----
NNAGGGACAAGGGCNC

MA0467.1_Crx/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GMGGACCAGT
AAGAGGATTAG-

PH0025.1_Dmbx1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GMGGACCAGT---
TGAACCGGATTAATGAA

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GMGGACCAGT
--GGATTAGC

PH0129.1_Otx1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GMGGACCAGT----
AGAGGGGATTAATTTAT

PH0035.1_Gsc/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GMGGACCAGT----
NNAAGGGATTAACGANT

PH0138.1_Pitx2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GMGGACCAGT----
TGAAGGGATTAATCATC

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GMGGACCAGT-
-GGGAGGACNG

PH0015.1_Crx/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GMGGACCAGT--
CGTTGGGGATTAGCCT

MA0056.1_MZF1_1-4/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GMGGACCAGT
TGGGGA-----