Information for motif18


Reverse Opposite:

p-value:1e-10
log p-value:-2.365e+01
Information Content per bp:1.822
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif5.21%
Number of Background Sequences with motif42.9
Percentage of Background Sequences with motif1.87%
Average Position of motif in Targets392.1 +/- 282.0bp
Average Position of motif in Background468.9 +/- 344.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------CCAGTGCCTC
NNNNTGCCAGTGATTG

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCAGTGCCTC-
-CACTTCCTCT

MA0080.3_Spi1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCAGTGCCTC-----
NCACTTCCTCTTTTN

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CCAGTGCCTC-
NNNANTGCAGTGCNNTT

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCAGTGCCTC-
ACCACATCCTGT

PH0171.1_Nkx2-1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CCAGTGCCTC-
AANTTCAAGTGGCTTN

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCAGTGCCTC
TTAAGTGCTT-

MA0146.2_Zfx/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCAGTGCCTC
GGGGCCGAGGCCTG

MA0474.1_Erg/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCAGTGCCTC-
CCACTTCCTGT

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCAGTGCCTC
TTGAGTGSTT-