| p-value: | 1e-10 |
| log p-value: | -2.350e+01 |
| Information Content per bp: | 1.879 |
| Number of Target Sequences with motif | 32.0 |
| Percentage of Target Sequences with motif | 3.20% |
| Number of Background Sequences with motif | 18.9 |
| Percentage of Background Sequences with motif | 0.82% |
| Average Position of motif in Targets | 401.4 +/- 303.7bp |
| Average Position of motif in Background | 563.7 +/- 485.6bp |
| Strand Bias (log2 ratio + to - strand density) | -0.2 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PB0135.1_Hoxa3_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.74
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --TTAATCGACT--
CCTTAATNGNTTTT |
|
|
|
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
| Match Rank: | 2 |
| Score: | 0.70
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | TTAATCGACT
CTAATKGV-- |
|
|
|
PH0005.1_Barhl1/Jaspar
| Match Rank: | 3 |
| Score: | 0.70
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---TTAATCGACT---
GNNTTAATTGGTTGTT |
|
|
|
MA0467.1_Crx/Jaspar
| Match Rank: | 4 |
| Score: | 0.70
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | TTAATCGACT-
CTAATCCTCTT |
|
|
|
PH0006.1_Barhl2/Jaspar
| Match Rank: | 5 |
| Score: | 0.69
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---TTAATCGACT---
NNNTTAATTGGTTTTT |
|
|
|
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 6 |
| Score: | 0.69
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TTAATCGACT
GTTAATGGCC- |
|
|
|
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer
| Match Rank: | 7 |
| Score: | 0.68
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -TTAATCGACT
GKTAATGR--- |
|
|
|
Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer
| Match Rank: | 8 |
| Score: | 0.68
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | TTAATCGACT-
-TAATTGATTA |
|
|
|
MA0063.1_Nkx2-5/Jaspar
| Match Rank: | 9 |
| Score: | 0.67
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | TTAATCGACT
TTAATTG--- |
|
|
|
PH0088.1_Isl2/Jaspar
| Match Rank: | 10 |
| Score: | 0.66
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---TTAATCGACT---
AAATTAATTGATTTNG |
|
|
|
