Information for motif21


Reverse Opposite:

p-value:1e-9
log p-value:-2.261e+01
Information Content per bp:1.733
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.10%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets212.5 +/- 169.5bp
Average Position of motif in Background419.2 +/- 322.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGTGATGAGGTG--
AAACATAATGAGGTTGC

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGTGATGAGGTG--
GACGATAATGAGCTTGC

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGTGATGAGGTG---
AAAGATGATGTCATC

MA0488.1_JUN/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGTGATGAGGTG--
-AAGATGATGTCAT

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGTGATGAGGTG
AAAWWTGCTGACWWD

MA0596.1_SREBF2/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AGTGATGAGGTG--
----ATGGGGTGAT

MA0595.1_SREBF1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AGTGATGAGGTG--
----GTGGGGTGAT

PB0022.1_Gata5_1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGTGATGAGGTG--
TAAACTGATAAGAAGAT

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGTGATGAGGTG
NBWGATAAGR--

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGTGATGAGGTG
--AGAGGAAGTG