Information for motif23


Reverse Opposite:

p-value:1e-8
log p-value:-2.034e+01
Information Content per bp:1.594
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets447.6 +/- 233.8bp
Average Position of motif in Background393.1 +/- 177.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTTCAGTAGT
NTNTTCTTATCAGTNTN

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTTTCAGTAGT-----
NATTTAAGTACTTANNA

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTCAGTAGT
NCCTTATCTG----

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTCAGTAGT
YCTTATCWVN---

PB0023.1_Gata6_1/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTTCAGTAGT
NNANTCTTATCTNNNNN

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTTTTCAGTAGT
NNCTTATCTN----

MA0036.2_GATA2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CTTTTCAGTAGT
AGATTCTTATCTGT---

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTTTTCAGTAGT
--TTTTATTRGN

PH0111.1_Nkx2-2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTCAGTAGT---
NANTTTCAAGTGGTTAN

PB0006.1_Bcl6b_1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTTTTCAGTAGT---
TCTTTCGAGGAATTTG