Information for motif28


Reverse Opposite:

p-value:1e-7
log p-value:-1.730e+01
Information Content per bp:1.530
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets226.5 +/- 218.1bp
Average Position of motif in Background345.7 +/- 275.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0056.1_MZF1_1-4/Jaspar

Match Rank:1
Score:0.78
Offset:1
Orientation:forward strand
Alignment:GCGGGGAT
-TGGGGA-

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GCGGGGAT
CWGGCGGGAA-

PB0107.1_Ascl2_2/Jaspar

Match Rank:3
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------GCGGGGAT--
NATNGGGNGGGGANAN

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.69
Offset:-7
Orientation:reverse strand
Alignment:-------GCGGGGAT--
NAGANTGGCGGGGNGNA

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCGGGGAT-
GGCGGGAAAH

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCGGGGAT--
TGGCGGGAAAHB

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCGGGGAT-
GGCGGGAARN

MA0470.1_E2F4/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCGGGGAT-
GGGCGGGAAGG

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCGGGGAT--
GCAGTGATTT

MA0079.3_SP1/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GCGGGGAT
GGGGGCGGGGC-