Information for motif30


Reverse Opposite:

p-value:1e-6
log p-value:-1.558e+01
Information Content per bp:1.900
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets294.0 +/- 219.2bp
Average Position of motif in Background634.6 +/- 417.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----TGAATGAATGAA
ACTATGAATGAATGAT

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGAATGAATGAA---
NTTNTATGAATGTGNNC

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGAATGAATGAA
NNTNTCATGAATGT-

PH0146.1_Pou3f1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGAATGAATGAA---
AATTAATTAATTAATTC

PH0149.1_Pou3f4/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGAATGAATGAA---
AATTAATTAATTAATTC

PH0150.1_Pou4f3/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGAATGAATGAA---
AGTTATTAATGAGGTC

PH0019.1_Dbx2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGAATGAATGAA---
TTTAATTAATTAATTC

PH0142.1_Pou1f1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGAATGAATGAA---
GATTAATTAATTAAGTC

PB0005.1_Bbx_1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGAATGAATGAA---
TAATTCAATGAAGTG

PH0095.1_Lhx5/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGAATGAATGAA-----
CGAATTAATTAAATACT