Information for motif34


Reverse Opposite:

p-value:1e-6
log p-value:-1.449e+01
Information Content per bp:1.976
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets397.3 +/- 139.0bp
Average Position of motif in Background446.3 +/- 343.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0083.2_SRF/Jaspar

Match Rank:1
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------AAAGAAGGCA-
CATGCCCAAATAAGGCAA

MA0095.2_YY1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAAGAAGGCA--
CAAGATGGCGGC

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AAAGAAGGCA-----
----AAGGCAAGTGT

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAAGAAGGCA
--NGAAGC--

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAAGAAGGCA---
GAAAAAATTGCAAGG

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAAGAAGGCA--
CAAGATGGCGGC

MA0461.1_Atoh1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAAGAAGGCA
-CAGATGGC-

MA0598.1_EHF/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAAGAAGGCA
CAGGAAGG--

MA0149.1_EWSR1-FLI1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAAGAAGGCA------
GGAAGGAAGGAAGGAAGG

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAAGAAGGCA
AACAGATGGC-