Information for motif38


Reverse Opposite:

p-value:1e-5
log p-value:-1.226e+01
Information Content per bp:1.865
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif3.90%
Number of Background Sequences with motif40.1
Percentage of Background Sequences with motif1.75%
Average Position of motif in Targets376.7 +/- 316.8bp
Average Position of motif in Background335.6 +/- 266.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0032.1_FOXC1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--STAGTASG
GGTAAGTA--

PB0090.1_Zbtb12_1/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----STAGTASG----
NNGATCTAGAACCTNNN

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----STAGTASG----
NNNTTAGGTAGCNTNT

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----STAGTASG-----
ACTCCAAGTACTTGGAA

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----STAGTASG----
NNTGTAGGTAGCANNT

MA0122.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-STAGTASG
TTAAGTGGA

PB0181.1_Spdef_2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---STAGTASG-----
CTACTAGGATGTNNTN

PB0194.1_Zbtb12_2/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----STAGTASG--
TATCATTAGAACGCT

PB0187.1_Tcf7_2/Jaspar

Match Rank:9
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------STAGTASG-
NNNTTTNTAATACNG

PB0096.1_Zfp187_1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---STAGTASG---
TTATTAGTACATAN