Information for motif4


Reverse Opposite:

p-value:1e-12
log p-value:-2.801e+01
Information Content per bp:1.740
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets332.0 +/- 311.4bp
Average Position of motif in Background496.5 +/- 392.5bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:ATAGTGTTGTAA
--NATGTTGCAA

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ATAGTGTTGTAA-
---ATGATGCAAT

MA0133.1_BRCA1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ATAGTGTTGTAA
---GTGTTGN--

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ATAGTGTTGTAA-
---MTGATGCAAT

MA0025.1_NFIL3/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ATAGTGTTGTAA---
----TTATGTAACAT

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATAGTGTTGTAA---
ANATTTTTGCAANTN

PB0120.1_Foxj1_2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATAGTGTTGTAA---
GTNTTGTTGTGANNT

PB0194.1_Zbtb12_2/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ATAGTGTTGTAA-----
--AGNGTTCTAATGANN

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ATAGTGTTGTAA-
----TTATGCAAT

MA0488.1_JUN/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATAGTGTTGTAA-
AAGATGATGTCAT