Information for motif43


Reverse Opposite:

p-value:1e-4
log p-value:-9.309e+00
Information Content per bp:1.971
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets263.2 +/- 171.5bp
Average Position of motif in Background367.7 +/- 79.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.80
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGGCGGCTGG----
GGNGCGNCTGTTNNN

PB0110.1_Bcl6b_2/Jaspar

Match Rank:2
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GGGCGGCTGG
NNTNAGGGGCGGNNNN

PB0202.1_Zfp410_2/Jaspar

Match Rank:3
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GGGCGGCTGG-
NNTNNGGGGCGGNGNGN

PB0143.1_Klf7_2/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCGGCTGG--
NNNTNGGGCGTATNNTN

MA0024.2_E2F1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGGCGGCTGG
CGGGCGGGAGG

MA0522.1_Tcf3/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGCGGCTGG-
NTGCAGCTGTG

MA0500.1_Myog/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGGCGGCTGG--
-GACAGCTGCAG

MA0516.1_SP2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGGCGGCTGG--
GGGNGGGGGCGGGGC

PB0097.1_Zfp281_1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGGCTGG---
GGGGGGGGGGGGGGA

MA0499.1_Myod1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGGCTGG-
NGNGACAGCTGCN