Information for motif48


Reverse Opposite:

p-value:1e-3
log p-value:-7.453e+00
Information Content per bp:1.610
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif14.5
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets432.8 +/- 276.3bp
Average Position of motif in Background703.6 +/- 473.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0198.1_Zfp128_2/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CTGTATCTATAT---
-TGTATATATATACC

PB0080.1_Tbp_1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTGTATCTATAT---
NANTTATATATAANGN

MA0033.1_FOXL1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTGTATCTATAT
---TATGTNTA-

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTGTATCTATAT-
TCTTTANTAATANN

PB0019.1_Foxl1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTGTATCTATAT---
NNNTTTGTTTACATTTN

MA0042.1_FOXI1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTGTATCTATAT
GGATGTTTGTTT--

MA0481.1_FOXP1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTGTATCTATAT---
CTTTGTTTACTTTTN

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTGTATCTATAT
NNNNNNCTTTTATAN

MA0108.2_TBP/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGTATCTATAT
NNNNNNCTTTTATAN

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTGTATCTATAT
---TGTTTATTT