Information for motif49


Reverse Opposite:

p-value:1e-2
log p-value:-6.151e+00
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets380.4 +/- 361.1bp
Average Position of motif in Background526.8 +/- 652.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ACGGGCTG
---NGCTN

MA0597.1_THAP1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACGGGCTG
TNNGGGCAG

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ACGGGCTG-----
TATTATGGGATGGATAA

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:ACGGGCTG--
----GCTGTG

MA0117.1_Mafb/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ACGGGCTG----
----GCTGACGC

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ACGGGCTG
GGGTACGTGC--

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACGGGCTG
GGACGTGC--

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACGGGCTG
TACGTGCV-

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACGGGCTG-
-TWGTCTGV

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ACGGGCTG----
NNTNAGGGGCGGNNNN