Information for motif5


Reverse Opposite:

p-value:1e-12
log p-value:-2.801e+01
Information Content per bp:1.862
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets365.5 +/- 160.3bp
Average Position of motif in Background678.8 +/- 179.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0058.1_Sfpi1_1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TAGTTCCTATTT-
NNACTTCCTCTTNN

MA0080.3_Spi1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TAGTTCCTATTT--
NCACTTCCTCTTTTN

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TAGTTCCTATTT
NNTTTTTCTTATNT

PB0115.1_Ehf_2/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TAGTTCCTATTT-
TAGTATTTCCGATCTT

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:5
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:TAGTTCCTATTT----
------CTATTTTTGG

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TAGTTCCTATTT
-ACTTCCTGTT-

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TAGTTCCTATTT-
-AGTTTCAGTTTC

PB0012.1_Elf3_1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TAGTTCCTATTT
TTACTTCCTNGTN

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TAGTTCCTATTT--
TCAGTTTCATTTTCC

MA0497.1_MEF2C/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TAGTTCCTATTT-------
----TTCTATTTTTAGNNN