Information for motif7


Reverse Opposite:

p-value:1e-12
log p-value:-2.801e+01
Information Content per bp:1.723
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets275.1 +/- 205.4bp
Average Position of motif in Background188.1 +/- 77.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGTCTTATTATC---
GCAACCTCATTATNNNN

PH0075.1_Hoxd10/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGTCTTATTATC--
NTNAATTTTATTGNATT

PB0022.1_Gata5_1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGTCTTATTATC------
-NTNTTCTTATCAGTNTN

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGTCTTATTATC---
NNNACCTCATTATCNTN

PH0013.1_Cdx2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGTCTTATTATC---
NAATTTTATTACCNNN

PH0046.1_Hoxa10/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGTCTTATTATC--
TNAATTTTATTACCTN

PH0012.1_Cdx1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGTCTTATTATC---
NAATTTTATTACCTNN

PB0122.1_Foxk1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGTCTTATTATC--
NNNTGTTGTTGTTNG

PB0174.1_Sox30_2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGTCTTATTATC---
NCGTATTATAATCNTA

PB0141.1_Isgf3g_2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGTCTTATTATC-
NNGTANTGTTTTNC