Information for motif8


Reverse Opposite:

p-value:1e-12
log p-value:-2.771e+01
Information Content per bp:1.791
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets389.7 +/- 241.4bp
Average Position of motif in Background903.0 +/- 381.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTGGGCCCCAAA
NNNNTTGGGCACNNCN

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTGGGCCCCAAA---
AGCTCGGCGCCAAAAGC

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTGGGCCCCAAA---
CCTTCGGCGCCAAAAGG

MA0163.1_PLAG1/Jaspar

Match Rank:4
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TTGGGCCCCAAA
CCCCCTTGGGCCCC---

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTGGGCCCCAAA--
NNNGGGGCGCCCCCNN

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TTGGGCCCCAAA-
-AGGTCTCTAACC

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TTGGGCCCCAAA--
CTCCAGGGGTCAATTGA

MA0161.1_NFIC/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TTGGGCCCCAAA
TTGGCA------

PB0201.1_Zfp281_2/Jaspar

Match Rank:9
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----TTGGGCCCCAAA
NNNATTGGGGGTNTCCT

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----TTGGGCCCCAAA
CCGATTGGCT------