Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 1000)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 2290)	% of Background Sequences with Motif
ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e-2	-4.863e+00	1.0000	27.0	2.70%	37.1	1.62%
PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e-1	-3.956e+00	1.0000	27.0	2.70%	40.7	1.78%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e-1	-3.325e+00	1.0000	120.0	12.01%	234.2	10.22%
NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e-1	-2.860e+00	1.0000	77.0	7.71%	147.4	6.43%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e-1	-2.640e+00	1.0000	2.0	0.20%	1.0	0.04%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e-1	-2.371e+00	1.0000	351.0	35.14%	759.3	33.13%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e-1	-2.366e+00	1.0000	73.0	7.31%	143.6	6.27%
Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-2.178e+00	1.0000	20.0	2.00%	34.7	1.51%
GATA-DR8(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-2.075e+00	1.0000	32.0	3.20%	60.0	2.62%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-1.934e+00	1.0000	3.0	0.30%	3.7	0.16%
E2F(E2F)/Cell-Cycle-Exp/Homer	TTSGCGCGAAAA	1e0	-1.735e+00	1.0000	4.0	0.40%	5.4	0.24%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer	GYCATCMATCAT	1e0	-1.612e+00	1.0000	43.0	4.30%	86.9	3.79%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-1.374e+00	1.0000	13.0	1.30%	24.7	1.08%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-1.335e+00	1.0000	91.0	9.11%	195.4	8.53%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	-1.265e+00	1.0000	16.0	1.60%	31.1	1.36%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.143e+00	1.0000	118.0	11.81%	259.3	11.31%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-1.092e+00	1.0000	78.0	7.81%	170.6	7.44%
EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-1.040e+00	1.0000	1.0	0.10%	1.9	0.08%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-1.037e+00	1.0000	86.0	8.61%	189.1	8.25%
PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-1.033e+00	1.0000	228.0	22.82%	511.9	22.33%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-9.905e-01	1.0000	591.0	59.16%	1343.1	58.60%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-9.894e-01	1.0000	3.0	0.30%	5.0	0.22%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-9.764e-01	1.0000	175.0	17.52%	392.3	17.12%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-9.663e-01	1.0000	73.0	7.31%	161.5	7.05%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-9.261e-01	1.0000	667.0	66.77%	1520.6	66.34%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-9.132e-01	1.0000	490.0	49.05%	1114.9	48.64%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-8.959e-01	1.0000	83.0	8.31%	185.1	8.08%
TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-8.581e-01	1.0000	15.0	1.50%	32.1	1.40%
PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-8.358e-01	1.0000	82.0	8.21%	184.4	8.05%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-8.335e-01	1.0000	26.0	2.60%	57.1	2.49%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e0	-8.316e-01	1.0000	14.0	1.40%	30.7	1.34%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-8.316e-01	1.0000	14.0	1.40%	30.5	1.33%
GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-8.168e-01	1.0000	44.0	4.40%	99.0	4.32%
Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-8.159e-01	1.0000	55.0	5.51%	123.3	5.38%
Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-8.083e-01	1.0000	221.0	22.12%	502.2	21.91%
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-7.947e-01	1.0000	39.0	3.90%	87.7	3.82%
LXRE(NR/DR4)/BLRP(RAW)-LXRb-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-7.771e-01	1.0000	56.0	5.61%	127.0	5.54%
Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-7.656e-01	1.0000	150.0	15.02%	342.0	14.92%
Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-7.535e-01	1.0000	72.0	7.21%	163.1	7.12%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-7.130e-01	1.0000	17.0	1.70%	38.2	1.67%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-7.121e-01	1.0000	182.0	18.22%	416.7	18.18%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-6.541e-01	1.0000	18.0	1.80%	41.8	1.82%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-6.533e-01	1.0000	2.0	0.20%	4.2	0.18%
GFY-Staf/Promoters/Homer	RACTACAATTCCCAGAAKGC	1e0	-6.429e-01	1.0000	8.0	0.80%	18.7	0.82%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-6.252e-01	1.0000	95.0	9.51%	219.9	9.59%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-6.054e-01	1.0000	496.0	49.65%	1141.1	49.78%
NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer	GGGGGAATCCCC	1e0	-6.020e-01	1.0000	19.0	1.90%	44.7	1.95%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-5.783e-01	1.0000	18.0	1.80%	42.9	1.87%
NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer	GGAAATTCCC	1e0	-5.756e-01	1.0000	12.0	1.20%	28.9	1.26%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-5.671e-01	1.0000	317.0	31.73%	732.7	31.97%
RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-5.631e-01	1.0000	233.0	23.32%	539.6	23.54%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-5.626e-01	1.0000	131.0	13.11%	304.0	13.26%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-5.470e-01	1.0000	56.0	5.61%	131.6	5.74%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-5.447e-01	1.0000	11.0	1.10%	26.6	1.16%
GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-5.374e-01	1.0000	25.0	2.50%	59.5	2.59%
GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-5.213e-01	1.0000	54.0	5.41%	127.8	5.58%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-4.452e-01	1.0000	2.0	0.20%	6.0	0.26%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-4.436e-01	1.0000	23.0	2.30%	56.2	2.45%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-4.251e-01	1.0000	305.0	30.53%	712.9	31.10%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-4.067e-01	1.0000	97.0	9.71%	231.5	10.10%
GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-3.674e-01	1.0000	75.0	7.51%	181.7	7.93%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-3.592e-01	1.0000	12.0	1.20%	31.4	1.37%
Pax7-longest(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-3.570e-01	1.0000	21.0	2.10%	53.9	2.35%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-3.500e-01	1.0000	23.0	2.30%	58.5	2.55%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-3.487e-01	1.0000	51.0	5.11%	125.6	5.48%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	-3.317e-01	1.0000	11.0	1.10%	29.1	1.27%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-3.293e-01	1.0000	68.0	6.81%	166.4	7.26%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-3.245e-01	1.0000	130.0	13.01%	312.0	13.61%
c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer	VCCACGTG	1e0	-3.242e-01	1.0000	54.0	5.41%	134.0	5.84%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-3.225e-01	1.0000	81.0	8.11%	197.8	8.63%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-3.218e-01	1.0000	115.0	11.51%	277.6	12.11%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	-3.070e-01	1.0000	264.0	26.43%	625.2	27.28%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-3.032e-01	1.0000	235.0	23.52%	558.2	24.35%
HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-2.893e-01	1.0000	43.0	4.30%	108.1	4.72%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-2.804e-01	1.0000	264.0	26.43%	627.8	27.39%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-2.758e-01	1.0000	827.0	82.78%	1915.1	83.55%
E-box(HLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-2.658e-01	1.0000	4.0	0.40%	12.4	0.54%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-2.546e-01	1.0000	880.0	88.09%	2035.2	88.79%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-2.544e-01	1.0000	47.0	4.70%	119.0	5.19%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-2.531e-01	1.0000	352.0	35.24%	833.4	36.36%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-2.465e-01	1.0000	274.0	27.43%	653.7	28.52%
E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-2.358e-01	1.0000	334.0	33.43%	793.2	34.60%
GATA:SCL/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-2.349e-01	1.0000	29.0	2.90%	76.4	3.33%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-2.260e-01	1.0000	22.0	2.20%	59.2	2.58%
bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-2.238e-01	1.0000	169.0	16.92%	410.5	17.91%
E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-2.163e-01	1.0000	309.0	30.93%	737.9	32.19%
bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-2.163e-01	1.0000	43.0	4.30%	112.0	4.89%
OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-2.106e-01	1.0000	97.0	9.71%	241.2	10.52%
SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-2.038e-01	1.0000	680.0	68.07%	1590.0	69.37%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-2.037e-01	1.0000	327.0	32.73%	780.7	34.06%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-1.915e-01	1.0000	609.0	60.96%	1429.7	62.38%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-1.889e-01	1.0000	693.0	69.37%	1620.6	70.70%
Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-1.852e-01	1.0000	501.0	50.15%	1183.3	51.63%
Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-1.839e-01	1.0000	82.0	8.21%	207.2	9.04%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e0	-1.830e-01	1.0000	199.0	19.92%	484.5	21.14%
GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-1.822e-01	1.0000	19.0	1.90%	53.6	2.34%
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-1.762e-01	1.0000	66.0	6.61%	169.1	7.38%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-1.753e-01	1.0000	78.0	7.81%	198.4	8.65%
Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-1.709e-01	1.0000	38.0	3.80%	101.6	4.43%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-1.673e-01	1.0000	112.0	11.21%	280.5	12.24%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer	TBGCACGCAA	1e0	-1.663e-01	1.0000	104.0	10.41%	261.5	11.41%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	MACAGGAAGT	1e0	-1.659e-01	1.0000	62.0	6.21%	160.3	6.99%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	-1.613e-01	1.0000	39.0	3.90%	104.2	4.54%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-1.559e-01	1.0000	737.0	73.77%	1723.5	75.19%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-1.537e-01	1.0000	17.0	1.70%	49.4	2.16%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-1.537e-01	1.0000	17.0	1.70%	49.4	2.16%
PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-1.500e-01	1.0000	189.0	18.92%	464.0	20.24%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-1.483e-01	1.0000	5.0	0.50%	17.4	0.76%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-1.445e-01	1.0000	476.0	47.65%	1132.0	49.38%
Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.426e-01	1.0000	13.0	1.30%	39.8	1.74%
Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-1.413e-01	1.0000	47.0	4.70%	125.9	5.49%
Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-1.393e-01	1.0000	93.0	9.31%	237.1	10.34%
MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-1.389e-01	1.0000	177.0	17.72%	437.8	19.10%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-1.310e-01	1.0000	158.0	15.82%	393.2	17.15%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-1.279e-01	1.0000	45.0	4.50%	121.5	5.30%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-1.251e-01	1.0000	122.0	12.21%	308.6	13.47%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-1.242e-01	1.0000	231.0	23.12%	566.6	24.72%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-1.217e-01	1.0000	42.0	4.20%	114.0	4.98%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-1.209e-01	1.0000	70.0	7.01%	183.1	7.99%
HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-1.198e-01	1.0000	50.0	5.01%	134.5	5.87%
CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-1.197e-01	1.0000	1.0	0.10%	5.9	0.26%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-1.188e-01	1.0000	162.0	16.22%	404.9	17.66%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-1.187e-01	1.0000	206.0	20.62%	508.6	22.19%
TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-1.151e-01	1.0000	137.0	13.71%	345.3	15.07%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-1.145e-01	1.0000	142.0	14.21%	357.1	15.58%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-1.138e-01	1.0000	204.0	20.42%	504.3	22.00%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.135e-01	1.0000	51.0	5.11%	137.0	5.98%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-1.074e-01	1.0000	285.0	28.53%	695.8	30.36%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-1.035e-01	1.0000	208.0	20.82%	515.4	22.48%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-1.026e-01	1.0000	49.0	4.90%	133.1	5.80%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-1.025e-01	1.0000	507.0	50.75%	1209.1	52.75%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-9.854e-02	1.0000	203.0	20.32%	504.2	22.00%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-9.793e-02	1.0000	76.0	7.61%	200.3	8.74%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-9.475e-02	1.0000	34.0	3.40%	96.5	4.21%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-9.405e-02	1.0000	275.0	27.53%	674.7	29.43%
ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER	AGTTTCASTTTC	1e0	-9.335e-02	1.0000	20.0	2.00%	60.7	2.65%
Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-9.177e-02	1.0000	139.0	13.91%	353.6	15.43%
CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-8.765e-02	1.0000	96.0	9.61%	250.3	10.92%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-8.659e-02	1.0000	98.0	9.81%	256.0	11.17%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-8.652e-02	1.0000	122.0	12.21%	313.8	13.69%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-8.531e-02	1.0000	38.0	3.80%	107.7	4.70%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-8.514e-02	1.0000	162.0	16.22%	409.7	17.87%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	-8.427e-02	1.0000	16.0	1.60%	50.9	2.22%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-7.129e-02	1.0000	39.0	3.90%	111.7	4.87%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-7.010e-02	1.0000	25.0	2.50%	75.3	3.29%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-7.005e-02	1.0000	60.0	6.01%	164.8	7.19%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-6.876e-02	1.0000	274.0	27.43%	678.0	29.58%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-6.821e-02	1.0000	444.0	44.44%	1072.5	46.79%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-6.783e-02	1.0000	411.0	41.14%	996.7	43.48%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-6.357e-02	1.0000	108.0	10.81%	283.4	12.36%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-5.886e-02	1.0000	164.0	16.42%	419.9	18.32%
FOXA1:AR/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-5.746e-02	1.0000	36.0	3.60%	105.9	4.62%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-5.452e-02	1.0000	418.0	41.84%	1016.3	44.34%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-5.375e-02	1.0000	561.0	56.16%	1344.4	58.65%
Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-5.165e-02	1.0000	206.0	20.62%	521.3	22.74%
NRF1/Promoter/Homer	STGCGCATGCGC	1e0	-5.054e-02	1.0000	5.0	0.50%	21.1	0.92%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-5.049e-02	1.0000	56.0	5.61%	157.3	6.86%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-5.041e-02	1.0000	568.0	56.86%	1361.2	59.39%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-4.900e-02	1.0000	220.0	22.02%	555.1	24.22%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-4.758e-02	1.0000	351.0	35.14%	863.7	37.68%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-4.534e-02	1.0000	58.0	5.81%	163.3	7.12%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-4.210e-02	1.0000	318.0	31.83%	788.2	34.39%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-4.120e-02	1.0000	353.0	35.34%	870.1	37.96%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e0	-4.033e-02	1.0000	202.0	20.22%	515.3	22.48%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-3.524e-02	1.0000	71.0	7.11%	198.5	8.66%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-3.449e-02	1.0000	93.0	9.31%	253.5	11.06%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-3.343e-02	1.0000	343.0	34.33%	850.8	37.12%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-3.343e-02	1.0000	343.0	34.33%	850.4	37.10%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-3.268e-02	1.0000	62.0	6.21%	176.2	7.69%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-3.029e-02	1.0000	182.0	18.22%	471.2	20.56%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-3.016e-02	1.0000	197.0	19.72%	507.3	22.13%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-2.999e-02	1.0000	347.0	34.73%	861.8	37.60%
RBPJ:Ebox/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-2.913e-02	1.0000	62.0	6.21%	177.4	7.74%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer	CYAAAAATAG	1e0	-2.828e-02	1.0000	250.0	25.03%	634.6	27.69%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-2.652e-02	1.0000	208.0	20.82%	535.3	23.35%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-2.622e-02	1.0000	151.0	15.12%	398.0	17.37%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-2.622e-02	1.0000	541.0	54.15%	1310.0	57.15%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-2.612e-02	1.0000	280.0	28.03%	706.8	30.84%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-2.323e-02	1.0000	150.0	15.02%	397.2	17.33%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-2.273e-02	1.0000	380.0	38.04%	942.8	41.13%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-2.161e-02	1.0000	3.0	0.30%	17.9	0.78%
BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer	NHAACBGYYV	1e0	-2.097e-02	1.0000	346.0	34.63%	864.1	37.70%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	-2.065e-02	1.0000	45.0	4.50%	136.1	5.94%
Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-1.953e-02	1.0000	150.0	15.02%	399.1	17.41%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-1.946e-02	1.0000	32.0	3.20%	103.0	4.49%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-1.893e-02	1.0000	225.0	22.52%	581.0	25.35%
STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-1.885e-02	1.0000	156.0	15.62%	414.8	18.10%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-1.882e-02	1.0000	95.0	9.51%	264.7	11.55%
CHR/Cell-Cycle-Exp/Homer	SRGTTTCAAA	1e0	-1.871e-02	1.0000	259.0	25.93%	661.2	28.84%
CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-1.850e-02	1.0000	264.0	26.43%	673.8	29.40%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-1.744e-02	1.0000	31.0	3.10%	100.8	4.40%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-1.628e-02	1.0000	642.0	64.26%	1545.8	67.44%
Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-1.586e-02	1.0000	55.0	5.51%	164.6	7.18%
T1ISRE(IRF)/Ifnb-Exp/Homer	ACTTTCGTTTCT	1e0	-1.581e-02	1.0000	2.0	0.20%	14.3	0.62%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-1.495e-02	1.0000	141.0	14.11%	380.7	16.61%
c-Myc/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-1.354e-02	1.0000	87.0	8.71%	247.1	10.78%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.310e-02	1.0000	149.0	14.91%	401.4	17.51%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-1.234e-02	1.0000	224.0	22.42%	583.7	25.47%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-1.230e-02	1.0000	229.0	22.92%	595.8	25.99%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-1.151e-02	1.0000	339.0	33.93%	856.5	37.36%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-1.150e-02	1.0000	25.0	2.50%	86.2	3.76%
VDR(NR/DR3)/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-1.118e-02	1.0000	37.0	3.70%	119.3	5.21%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-1.108e-02	1.0000	196.0	19.62%	517.6	22.58%
BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-1.096e-02	1.0000	382.0	38.24%	957.7	41.78%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	GCTGTGGTTW	1e0	-1.016e-02	1.0000	170.0	17.02%	455.7	19.88%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	-9.118e-03	1.0000	165.0	16.52%	444.1	19.37%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer	CCATATATGGNM	1e0	-8.399e-03	1.0000	98.0	9.81%	279.5	12.19%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-7.921e-03	1.0000	97.0	9.71%	277.2	12.09%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-6.032e-03	1.0000	151.0	15.12%	414.6	18.09%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-5.573e-03	1.0000	9.0	0.90%	42.5	1.86%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-5.435e-03	1.0000	475.0	47.55%	1181.1	51.53%
ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-5.168e-03	1.0000	8.0	0.80%	39.2	1.71%
GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-4.761e-03	1.0000	23.0	2.30%	85.2	3.72%
PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-4.479e-03	1.0000	61.0	6.11%	189.7	8.28%
ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-4.403e-03	1.0000	283.0	28.33%	736.6	32.14%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-3.415e-03	1.0000	347.0	34.73%	890.4	38.85%
HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-3.414e-03	1.0000	86.0	8.61%	256.2	11.18%
Mouse_Recombination_Hotspot/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-3.359e-03	1.0000	18.0	1.80%	72.3	3.16%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-3.322e-03	1.0000	212.0	21.22%	569.8	24.86%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-3.182e-03	1.0000	134.0	13.41%	379.0	16.53%
Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-3.054e-03	1.0000	272.0	27.23%	714.3	31.16%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-2.786e-03	1.0000	203.0	20.32%	549.4	23.97%
NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-2.648e-03	1.0000	16.0	1.60%	68.0	2.97%
NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-1.738e-03	1.0000	244.0	24.42%	653.7	28.52%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-1.677e-03	1.0000	159.0	15.92%	446.7	19.49%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-1.597e-03	1.0000	67.0	6.71%	212.5	9.27%
USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-1.528e-03	1.0000	62.0	6.21%	199.1	8.69%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	ATTTTCCATT	1e0	-1.491e-03	1.0000	283.0	28.33%	748.0	32.63%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-1.409e-03	1.0000	432.0	43.24%	1098.8	47.94%
ERE(NR/IR3)/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-1.396e-03	1.0000	43.0	4.30%	148.7	6.49%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer	CTGTTTAC	1e0	-1.072e-03	1.0000	455.0	45.55%	1154.0	50.35%
n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-1.036e-03	1.0000	112.0	11.21%	332.4	14.50%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e0	-9.610e-04	1.0000	157.0	15.72%	446.3	19.47%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-8.630e-04	1.0000	6.0	0.60%	38.7	1.69%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-8.490e-04	1.0000	195.0	19.52%	541.8	23.64%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-7.910e-04	1.0000	540.0	54.05%	1351.2	58.95%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-2.790e-04	1.0000	624.0	62.46%	1549.6	67.60%
FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer	AGGTCANTGACCTB	1e0	-2.630e-04	1.0000	62.0	6.21%	210.7	9.19%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-2.260e-04	1.0000	245.0	24.52%	675.1	29.45%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-1.800e-04	1.0000	144.0	14.41%	427.7	18.66%
MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-1.740e-04	1.0000	100.0	10.01%	314.4	13.71%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-1.080e-04	1.0000	380.0	38.04%	1003.2	43.76%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-6.000e-05	1.0000	190.0	19.02%	551.3	24.05%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-2.100e-05	1.0000	250.0	25.03%	707.3	30.86%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-1.400e-05	1.0000	234.0	23.42%	671.2	29.28%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-3.000e-06	1.0000	425.0	42.54%	1138.2	49.66%