Information for motif13


Reverse Opposite:

p-value:1e-18
log p-value:-4.242e+01
Information Content per bp:1.715
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets504.9 +/- 440.1bp
Average Position of motif in Background704.5 +/- 403.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGTCMTTAAG
ACGTCA-----

PB0108.1_Atf1_2/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CGTCMTTAAG
NTTATTCGTCATNC--

PB0176.1_Sox5_2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CGTCMTTAAG--
TATCATAATTAAGGA

MA0018.2_CREB1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CGTCMTTAAG
TGACGTCA-----

PB0131.1_Gmeb1_2/Jaspar

Match Rank:5
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------CGTCMTTAAG
TGGGCGACGTCGTTAA-

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGTCMTTAAG---
CACGGCAGTTGGTNN

PH0073.1_Hoxc9/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CGTCMTTAAG---
GGAGGTCATTAATTAT

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGTCMTTAAG
-GTCATN---

PB0027.1_Gmeb1_1/Jaspar

Match Rank:9
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------CGTCMTTAAG
GAGTGTACGTAAGATGG

PB0004.1_Atf1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-7
Orientation:forward strand
Alignment:-------CGTCMTTAAG
ACGATGACGTCATCGA-