| p-value: | 1e-17 |
| log p-value: | -4.121e+01 |
| Information Content per bp: | 1.886 |
| Number of Target Sequences with motif | 35.0 |
| Percentage of Target Sequences with motif | 0.25% |
| Number of Background Sequences with motif | 4.9 |
| Percentage of Background Sequences with motif | 0.04% |
| Average Position of motif in Targets | 420.5 +/- 431.5bp |
| Average Position of motif in Background | 828.7 +/- 374.3bp |
| Strand Bias (log2 ratio + to - strand density) | -0.1 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PB0134.1_Hnf4a_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.63
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --CTTGGACCST----
NNATTGGACTTTNGNN |
|
|
|
MA0115.1_NR1H2::RXRA/Jaspar
| Match Rank: | 2 |
| Score: | 0.59
| | Offset: | -6
| | Orientation: | reverse strand |
| Alignment: | ------CTTGGACCST-
GTTGACCTTTGACCTTT |
|
|
|
MA0161.1_NFIC/Jaspar
| Match Rank: | 3 |
| Score: | 0.57
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | CTTGGACCST
-TTGGCA--- |
|
|
|
PB0030.1_Hnf4a_1/Jaspar
| Match Rank: | 4 |
| Score: | 0.57
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CTTGGACCST----
NNANTTGACCCCTNNNN |
|
|
|
MA0504.1_NR2C2/Jaspar
| Match Rank: | 5 |
| Score: | 0.55
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CTTGGACCST-
TGACCTCTGACCCCN |
|
|
|
PB0137.1_Irf3_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.55
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CTTGGACCST-----
-NNGCACCTTTCTCC |
|
|
|
TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer
| Match Rank: | 7 |
| Score: | 0.55
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CTTGGACCST
TGACCTTTGACCTC |
|
|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 8 |
| Score: | 0.54
| | Offset: | 3
| | Orientation: | reverse strand |
| Alignment: | CTTGGACCST
---TGACCT- |
|
|
|
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer
| Match Rank: | 9 |
| Score: | 0.54
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CTTGGACCST
TGACCTTGAN---- |
|
|
|
MA0502.1_NFYB/Jaspar
| Match Rank: | 10 |
| Score: | 0.54
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CTTGGACCST--
CTGATTGGTCNATTT |
|
|
|
