Information for motif17


Reverse Opposite:

p-value:1e-16
log p-value:-3.911e+01
Information Content per bp:1.968
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets449.6 +/- 337.0bp
Average Position of motif in Background602.7 +/- 513.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TAGGGTATAT-----
ANNNGGATATATCCNNN

PH0165.1_Six6_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAGGGTATAT-----
AATAGGGTATCAATTAT

PH0163.1_Six3/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAGGGTATAT-----
GATAGGGTATCACTAAT

PB0059.1_Six6_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAGGGTATAT-----
AATAGGGTATCATATAT

PH0166.1_Six6_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAGGGTATAT-----
AATAGGGTATCAATATT

PH0161.1_Six1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TAGGGTATAT-----
GATGGGGTATCATTTTT

MA0033.1_FOXL1/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TAGGGTATAT---
-----TATGTNTA

PH0162.1_Six2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAGGGTATAT-----
AATGGGGTATCACGTTT

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TAGGGTATAT-
AAGGATATNTN

PB0181.1_Spdef_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TAGGGTATAT--
CTACTAGGATGTNNTN