Information for motif23


Reverse Opposite:

p-value:1e-15
log p-value:-3.494e+01
Information Content per bp:1.530
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets386.4 +/- 338.3bp
Average Position of motif in Background416.3 +/- 250.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0056.1_MZF1_1-4/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GGTCCCCAAG
--TCCCCA--

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGTCCCCAAG---
GGGTGTGCCCAAAAGG

PB0158.1_Rfx3_2/Jaspar

Match Rank:3
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------GGTCCCCAAG-------
NNTNGNNGTAACCAAGNNNNAGN

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGTCCCCAAG-
AGGTCTCTAACC

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GGTCCCCAAG---
NTNNCGTATCCAAGTNN

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGTCCCCAAG---
-GTCCCCAGGGGA

MA0154.2_EBF1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGTCCCCAAG--
-GTCCCCAGGGA

MA0116.1_Zfp423/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGTCCCCAAG-----
GGCACCCAGGGGTGC

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGTCCCCAAG--
NGTCCCNNGGGA

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGTCCCCAAG
HTTTCCCASG