Information for motif32


Reverse Opposite:

p-value:1e-11
log p-value:-2.615e+01
Information Content per bp:1.530
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets486.4 +/- 389.8bp
Average Position of motif in Background343.2 +/- 203.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0151.1_ARID3A/Jaspar

Match Rank:1
Score:0.59
Offset:7
Orientation:forward strand
Alignment:CGGTGATATTAA-
-------ATTAAA

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGGTGATATTAA----
--CTAATATTGCTAAA

PH0150.1_Pou4f3/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGGTGATATTAA-------
---AGTTATTAATGAGGTC

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGGTGATATTAA
AGGTGTTAAT--

MA0160.1_NR4A2/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CGGTGATATTAA
--GTGACCTT--

PB0126.1_Gata5_2/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CGGTGATATTAA---
GACAGAGATATCAGTGT

MA0038.1_Gfi1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGGTGATATTAA
CNGTGATTTN--

PH0123.1_Obox3/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CGGTGATATTAA----
TGAGGGGGATTAACTAT

PH0037.1_Hdx/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGGTGATATTAA---
TNNNATGATTTCNNCNN

MA0483.1_Gfi1b/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CGGTGATATTAA
TGCTGTGATTT---