Information for motif33


Reverse Opposite:

p-value:1e-10
log p-value:-2.518e+01
Information Content per bp:1.958
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets434.1 +/- 303.8bp
Average Position of motif in Background730.7 +/- 688.5bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCATCTCCTA----
GATAACATCCTAGTAG

PB0128.1_Gcm1_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCATCTCCTA------
NTCNTCCCCTATNNGNN

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCATCTCCTA---
CTCAGCAGCTGCTACTG

MA0156.1_FEV/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCATCTCCTA
--ATTTCCTG

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GCATCTCCTA
ADGGYAGYAGCATCT-

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCATCTCCTA-
-CACTTCCTCT

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCATCTCCTA--
--ATTTCCTGTN

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCATCTCCTA-
-CACTTCCTGT

MA0136.1_ELF5/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCATCTCCTA
-TACTTCCTT

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCATCTCCTA---
NNGGCGACACCTCNNN