Information for motif34


Reverse Opposite:

p-value:1e-10
log p-value:-2.514e+01
Information Content per bp:1.530
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets446.5 +/- 322.7bp
Average Position of motif in Background498.4 +/- 249.5bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0162.1_Sfpi1_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTCCCGTAATT--
GGTTCCNNAATTTG

PH0055.1_Hoxa7_2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGTCCCGTAATT-----
-TNCCATTAATTACTNC

MA0075.1_Prrx2/Jaspar

Match Rank:3
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:TGTCCCGTAATT
-------TAATT

PH0024.1_Dlx5/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGTCCCGTAATT-------
---GGGGTAATTAGCTCTG

MA0125.1_Nobox/Jaspar

Match Rank:5
Score:0.60
Offset:7
Orientation:forward strand
Alignment:TGTCCCGTAATT---
-------TAATTGGT

PH0061.1_Hoxb6/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGTCCCGTAATT-------
---NNNGTAATTACNNATA

PH0039.1_Mnx1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGTCCCGTAATT-----
-NNNCACTAATTANTNN

MA0158.1_HOXA5/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TGTCCCGTAATT
----CACTAATT

MA0132.1_Pdx1/Jaspar

Match Rank:9
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TGTCCCGTAATT
------CTAATT

MA0043.1_HLF/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGTCCCGTAATT
GGTTACGCAATA