Information for motif36


Reverse Opposite:

p-value:1e-10
log p-value:-2.371e+01
Information Content per bp:1.946
Number of Target Sequences with motif375.0
Percentage of Target Sequences with motif2.66%
Number of Background Sequences with motif215.5
Percentage of Background Sequences with motif1.88%
Average Position of motif in Targets421.2 +/- 335.9bp
Average Position of motif in Background455.2 +/- 354.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GGACTSCC-----
TACGAGACTCCTCTAAC

NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGACTSCC--
GGGGATTCCCCC

PB0025.1_Glis2_1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGACTSCC-----
TATCGACCCCCCACAG

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGACTSCC----
--ACTTCCTBGT

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGACTSCC
CCWGGAATGY-

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGACTSCC----
--ACTTCCGGTN

ETS(ETS)/Promoter/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGACTSCC----
--ACTTCCGGTT

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGACTSCC-
NGGGGATTTCCC

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGACTSCC
NCTGGAATGC-

PB0058.1_Sfpi1_1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGACTSCC------
NNACTTCCTCTTNN