Information for motif40


Reverse Opposite:

p-value:1e-9
log p-value:-2.150e+01
Information Content per bp:1.841
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets297.7 +/- 212.7bp
Average Position of motif in Background354.5 +/- 349.3bp
Strand Bias (log2 ratio + to - strand density)-2.4
Multiplicity (# of sites on avg that occur together)1.81
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCCACCCTAAGC
ATCCAC-------

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCCACCCTAAGC-
AAGCCCCCCAAAAAT

PB0167.1_Sox13_2/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TCCACCCTAAGC
ANNTNCCCACCCANNAC

MA0599.1_KLF5/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCCACCCTAAGC
GCCCCGCCCC----

MA0057.1_MZF1_5-13/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCCACCCTAAGC
TTCCCCCTAC--

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TCCACCCTAAGC
CNGTCCTCCC-----

GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCCACCCTAAGC
GGACCACCCACG--

MA0039.2_Klf4/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCCACCCTAAGC
GCCCCACCCA----

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TCCACCCTAAGC-
ATCCCCGCCCCTAAAA

MA0079.3_SP1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TCCACCCTAAGC
GCCCCGCCCCC---