Information for motif43


Reverse Opposite:

p-value:1e-8
log p-value:-1.997e+01
Information Content per bp:1.986
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif0.18%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets390.4 +/- 349.9bp
Average Position of motif in Background684.4 +/- 534.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GGGGCTTCTT
---GCTTCC-

PB0201.1_Zfp281_2/Jaspar

Match Rank:2
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------GGGGCTTCTT
NNNATTGGGGGTNTCCT

NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGGGCTTCTT--
GGGGATTCCCCC

MA0101.1_REL/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGGGCTTCTT
GGGGATTTCC-

PB0025.1_Glis2_1/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GGGGCTTCTT--
NTNTGGGGGGTCNNNA

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:6
Score:0.54
Offset:-8
Orientation:reverse strand
Alignment:--------GGGGCTTCTT
ATTTTNGGGGGGCNN---

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGGGCTTCTT
--NGCTN---

PB0156.1_Plagl1_2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GGGGCTTCTT---
GCTGGGGGGTACCCCTT

MA0598.1_EHF/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGGGCTTCTT-
---CCTTCCTG

PB0143.1_Klf7_2/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GGGGCTTCTT---
NNNTNGGGCGTATNNTN