Information for motif44


Reverse Opposite:

p-value:1e-8
log p-value:-1.969e+01
Information Content per bp:1.530
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets393.8 +/- 324.7bp
Average Position of motif in Background585.0 +/- 643.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0002.1_Arid5a_1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGGTAGTATT------
--CTAATATTGCTAAA

PB0059.1_Six6_1/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGGTAGTATT---
AATAGGGTATCATATAT

MA0032.1_FOXC1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGGTAGTATT
GGTAAGTA--

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GGGTAGTATT-
NNNTTAGGTAGCNTNT

PH0166.1_Six6_2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGGTAGTATT---
AATAGGGTATCAATATT

PH0161.1_Six1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGGTAGTATT---
GATGGGGTATCATTTTT

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGGTAGTATT--
TGCGGAGTGGGACTGG

MA0046.1_HNF1A/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGGTAGTATT----
GGTTAATAATTAAC

PB0106.1_Arid5a_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGGTAGTATT-----
TNNTTTCGTATTNNANN

MA0027.1_En1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGGTAGTATT-
AAGTAGTGCCC