Information for motif48


Reverse Opposite:

p-value:1e-6
log p-value:-1.517e+01
Information Content per bp:1.530
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets340.4 +/- 299.5bp
Average Position of motif in Background617.2 +/- 318.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0018.2_CREB1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATAGCGTC-
-TGACGTCA

PB0127.1_Gata6_2/Jaspar

Match Rank:2
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------ATAGCGTC--
NGCTGCGATATCGNCGC

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------ATAGCGTC--
TCNCTTTACAGCGNNNT

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------ATAGCGTC--
TCNNTTTACAGCGNNNT

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ATAGCGTC
-CAGCC--

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ATAGCGTC-
---ACGTCA

PB0038.1_Jundm2_1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATAGCGTC-----
NCGATGACGTCATCGN

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ATAGCGTC
CAAGATGGCGGC

MA0033.1_FOXL1/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----ATAGCGTC
TATACATA-----

PB0004.1_Atf1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ATAGCGTC-----
ACGATGACGTCATCGA