Information for motif49


Reverse Opposite:

p-value:1e-6
log p-value:-1.425e+01
Information Content per bp:1.952
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif9.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets389.5 +/- 302.6bp
Average Position of motif in Background401.5 +/- 442.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0008.1_E2F2_1/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CGCGTTTT---
NTCGCGCGCCTTNNN

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CGCGTTTT---
ANCGCGCGCCCTTNN

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CGCGTTTT----
CCTTGCAATTTTTNN

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CGCGTTTT----
--TGGTTTCAGT

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGCGTTTT
TGCGTG--

PH0044.1_Homez/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CGCGTTTT----
AAAACATCGTTTTTAAG

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CGCGTTTT
GGCGCGCT--

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CGCGTTTT
NNTGTGGTTT

PB0141.1_Isgf3g_2/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CGCGTTTT--
NNGTANTGTTTTNC

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CGCGTTTT-
BRRCVGTTDN