Information for motif52


Reverse Opposite:

p-value:1e-5
log p-value:-1.370e+01
Information Content per bp:1.958
Number of Target Sequences with motif477.0
Percentage of Target Sequences with motif3.38%
Number of Background Sequences with motif311.1
Percentage of Background Sequences with motif2.71%
Average Position of motif in Targets433.9 +/- 363.9bp
Average Position of motif in Background445.3 +/- 363.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:AGGTAAAC----
NDGTAAACARRN

MA0030.1_FOXF2/Jaspar

Match Rank:2
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---AGGTAAAC---
CAAACGTAAACAAT

MA0031.1_FOXD1/Jaspar

Match Rank:3
Score:0.77
Offset:2
Orientation:forward strand
Alignment:AGGTAAAC--
--GTAAACAT

MA0593.1_FOXP2/Jaspar

Match Rank:4
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AGGTAAAC---
AAGTAAACAAA

MA0157.1_FOXO3/Jaspar

Match Rank:5
Score:0.76
Offset:1
Orientation:forward strand
Alignment:AGGTAAAC-
-TGTAAACA

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AGGTAAAC-
AAAGTAAACA

PB0017.1_Foxj3_1/Jaspar

Match Rank:7
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---AGGTAAAC------
AAAAAGTAAACAAACAC

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:8
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AGGTAAAC-
AAAGTAAACA

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:9
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:AGGTAAAC--
--GTAAACAG

PB0018.1_Foxk1_1/Jaspar

Match Rank:10
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---AGGTAAAC------
AAAATGTAAACAAACAG