Information for motif7


Reverse Opposite:

p-value:1e-22
log p-value:-5.147e+01
Information Content per bp:1.466
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets389.2 +/- 371.2bp
Average Position of motif in Background377.3 +/- 171.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0592.1_ESRRA/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ACCTTGGYSAGA
NGTGACCTTGG-----

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACCTTGGYSAGA
TGACCTTGAV----

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------ACCTTGGYSAGA
NNNNATGACCTTGANTN--

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACCTTGGYSAGA
TGACCTTGAN----

MA0141.2_Esrrb/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ACCTTGGYSAGA
TGACCTTGANNN--

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACCTTGGYSAGA
NTGACCTTGA-----

MA0161.1_NFIC/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACCTTGGYSAGA
---TTGGCA---

MA0138.2_REST/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------ACCTTGGYSAGA---
TTCAGCACCATGGACAGCGCC

MA0510.1_RFX5/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACCTTGGYSAGA--
CTCCCTGGCAACAGC

MA0509.1_Rfx1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACCTTGGYSAGA
GTTGCCATGGCAAC-