Information for motif8


Reverse Opposite:

p-value:1e-21
log p-value:-4.952e+01
Information Content per bp:1.826
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets474.5 +/- 279.9bp
Average Position of motif in Background367.0 +/- 323.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0032.1_FOXC1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGACCCAGTA
--GGTAAGTA

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CGACCCAGTA-
ANNTNCCCACCCANNAC

MA0072.1_RORA_2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CGACCCAGTA---
TTGACCTANTTATN

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGACCCAGTA-
ATGACTCAGCAD

PB0179.1_Sp100_2/Jaspar

Match Rank:5
Score:0.53
Offset:-8
Orientation:reverse strand
Alignment:--------CGACCCAGTA
NNTTTANNCGACGNA---

Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGACCCAGTA------
TGACCCAGTGACCTAC

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CGACCCAGTA--
NNCNTGACCCCGCTCT

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CGACCCAGTA--
NNNNTGACCCGGCGCG

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CGACCCAGTA-----
CCACACAGCAGGAGA

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CGACCCAGTA
TGACCT----