| p-value: | 1e-33 |
| log p-value: | -7.665e+01 |
| Information Content per bp: | 1.830 |
| Number of Target Sequences with motif | 60.0 |
| Percentage of Target Sequences with motif | 0.26% |
| Number of Background Sequences with motif | 3.9 |
| Percentage of Background Sequences with motif | 0.04% |
| Average Position of motif in Targets | 532.3 +/- 364.8bp |
| Average Position of motif in Background | 298.2 +/- 259.6bp |
| Strand Bias (log2 ratio + to - strand density) | 0.7 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PB0055.1_Rfx4_1/Jaspar
| Match Rank: | 1 |
| Score: | 0.61
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CACCGTTGCC------
-NNCGTTGCTATGGNN |
|
|
|
PB0056.1_Rfxdc2_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.61
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CACCGTTGCC------
-NCCGTTGCTANGNGN |
|
|
|
PB0131.1_Gmeb1_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.60
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CACCGTTGCC--
TNAACGACGTCGNCCA |
|
|
|
MA0600.1_RFX2/Jaspar
| Match Rank: | 4 |
| Score: | 0.60
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CACCGTTGCC--------
NNNCNGTTGCCATGGNAAC |
|
|
|
MA0133.1_BRCA1/Jaspar
| Match Rank: | 5 |
| Score: | 0.59
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | CACCGTTGCC
--GTGTTGN- |
|
|
|
SD0002.1_at_AC_acceptor/Jaspar
| Match Rank: | 6 |
| Score: | 0.58
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CACCGTTGCC--
-NNACTTGCCTT |
|
|
|
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
| Match Rank: | 7 |
| Score: | 0.58
| | Offset: | 4
| | Orientation: | reverse strand |
| Alignment: | CACCGTTGCC--
----CTTGGCAA |
|
|
|
RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer
| Match Rank: | 8 |
| Score: | 0.58
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CACCGTTGCC---
TGACCTTTGCCCTA |
|
|
|
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 9 |
| Score: | 0.58
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | CACCGTTGCC----
--CTGTTGCTAGGS |
|
|
|
MA0509.1_Rfx1/Jaspar
| Match Rank: | 10 |
| Score: | 0.57
| | Offset: | 4
| | Orientation: | reverse strand |
| Alignment: | CACCGTTGCC--------
----GTTGCCATGGNAAC |
|
|
|
