Information for motif17


Reverse Opposite:

p-value:1e-30
log p-value:-7.114e+01
Information Content per bp:1.892
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets405.3 +/- 351.1bp
Average Position of motif in Background605.7 +/- 427.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------ATCCTAGGGGCC
GATAACATCCTAGTAG--

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATCCTAGGGGCC
TCCCCTGGGGAC

MA0154.2_EBF1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATCCTAGGGGCC
-TCCCTGGGGAN

MA0155.1_INSM1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ATCCTAGGGGCC-
-TGTCAGGGGGCG

MA0116.1_Zfp423/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ATCCTAGGGGCC
GCACCCCTGGGTGCC

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATCCTAGGGGCC-
-TCCCNNGGGACN

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATCCTAGGGGCC-
ATTTCCCAGVAKSCY

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.55
Offset:7
Orientation:forward strand
Alignment:ATCCTAGGGGCC---
-------AGGCCTAG

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ATCCTAGGGGCC-
-GGTTAGAGACCT

MA0524.1_TFAP2C/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATCCTAGGGGCC---
TGCCCTGGGGCNANN