Information for motif18


Reverse Opposite:

p-value:1e-30
log p-value:-7.016e+01
Information Content per bp:1.865
Number of Target Sequences with motif84.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets368.5 +/- 274.2bp
Average Position of motif in Background383.9 +/- 239.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AASTCGGCTC
-----NGCTN

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AASTCGGCTC--
------GCTCCG

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AASTCGGCTC
NNACTTGCCTT

MA0131.1_HINFP/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AASTCGGCTC
TAACGTCCGC--

PB0203.1_Zfp691_2/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AASTCGGCTC-------
TACGAGACTCCTCTAAC

MA0122.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AASTCGGCTC
TTAAGTGGA---

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----AASTCGGCTC-
GGCAAAAGTCCAATAA

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.49
Offset:-6
Orientation:reverse strand
Alignment:------AASTCGGCTC-
NTNNTTAAGTGGNTNAN

PH0114.1_Nkx2-5/Jaspar

Match Rank:9
Score:0.48
Offset:-6
Orientation:reverse strand
Alignment:------AASTCGGCTC
AAATTCAAGTGGNTTN

PH0115.1_Nkx2-6/Jaspar

Match Rank:10
Score:0.48
Offset:-6
Orientation:reverse strand
Alignment:------AASTCGGCTC
AATNTTAAGTGGNTNN