| p-value: | 1e-25 |
| log p-value: | -5.788e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 102.0 |
| Percentage of Target Sequences with motif | 0.44% |
| Number of Background Sequences with motif | 13.0 |
| Percentage of Background Sequences with motif | 0.14% |
| Average Position of motif in Targets | 465.1 +/- 386.6bp |
| Average Position of motif in Background | 375.8 +/- 252.9bp |
| Strand Bias (log2 ratio + to - strand density) | 0.3 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
MA0514.1_Sox3/Jaspar
| Match Rank: | 1 |
| Score: | 0.68
| | Offset: | 3
| | Orientation: | forward strand |
| Alignment: | ATGCTTTTGT---
---CCTTTGTTTT |
|
|
|
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
| Match Rank: | 2 |
| Score: | 0.68
| | Offset: | 3
| | Orientation: | forward strand |
| Alignment: | ATGCTTTTGT-
---CCWTTGTY |
|
|
|
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
| Match Rank: | 3 |
| Score: | 0.63
| | Offset: | 3
| | Orientation: | forward strand |
| Alignment: | ATGCTTTTGT---
---CCATTGTTNY |
|
|
|
PB0071.1_Sox4_1/Jaspar
| Match Rank: | 4 |
| Score: | 0.63
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -ATGCTTTTGT------
TNNTCCTTTGTTCTNNT |
|
|
|
MA0143.3_Sox2/Jaspar
| Match Rank: | 5 |
| Score: | 0.63
| | Offset: | 3
| | Orientation: | forward strand |
| Alignment: | ATGCTTTTGT-
---CCTTTGTT |
|
|
|
PB0166.1_Sox12_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.62
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | ATGCTTTTGT------
ANTCCTTTGTCTNNNN |
|
|
|
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 7 |
| Score: | 0.61
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | ATGCTTTTGT--
--NCCATTGTTC |
|
|
|
PB0061.1_Sox11_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.60
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -ATGCTTTTGT------
NNNTCCTTTGTTCTNNN |
|
|
|
MA0164.1_Nr2e3/Jaspar
| Match Rank: | 9 |
| Score: | 0.59
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -ATGCTTTTGT
CAAGCTT---- |
|
|
|
PB0122.1_Foxk1_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.59
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --ATGCTTTTGT---
NNNTGTTGTTGTTNG |
|
|
|
