Information for motif22


Reverse Opposite:

p-value:1e-24
log p-value:-5.634e+01
Information Content per bp:1.496
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets374.1 +/- 357.5bp
Average Position of motif in Background981.7 +/- 185.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTAGAGAGGANR
CTTGAGTGGCT-

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTAGAGAGGANR
-TTGAGTGSTT-

MA0081.1_SPIB/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CTAGAGAGGANR
----AGAGGAA-

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTAGAGAGGANR
CTYRAGTGSY--

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CTAGAGAGGANR--
----AGAGGAAGTG

MA0080.3_Spi1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTAGAGAGGANR---
AAAAAGAGGAAGTGA

MA0474.1_Erg/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CTAGAGAGGANR---
----ACAGGAAGTGG

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTAGAGAGGANR-
---AACAGGAAGT

MA0098.2_Ets1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTAGAGAGGANR----
-NNNACAGGAAGTGGN

MA0598.1_EHF/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CTAGAGAGGANR-
-----CAGGAAGG