Information for motif25


Reverse Opposite:

p-value:1e-23
log p-value:-5.401e+01
Information Content per bp:1.530
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets477.9 +/- 400.4bp
Average Position of motif in Background375.4 +/- 340.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0498.1_Meis1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGTCACTACCCC
AGCTGTCACTCACCT

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGTCACTACCCC
GTTTCACTTCCG-

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGTCACTACCCC
SCTGTCARCACC--

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGTCACTACCCC-
---CACTTCCTCT

PH0105.1_Meis3/Jaspar

Match Rank:5
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------TGTCACTACCCC
AATTACCTGTCAATAC---

MA0080.3_Spi1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGTCACTACCCC-----
--NCACTTCCTCTTTTN

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------TGTCACTACCCC
AAGCACCTGTCAATAT---

PH0169.1_Tgif1/Jaspar

Match Rank:8
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------TGTCACTACCCC
NNNCAGCTGTCAATATN--

FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGTCACTACCCC
NAGGTCANTGACCT

PB0058.1_Sfpi1_1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGTCACTACCCC----
--NNACTTCCTCTTNN