Information for motif28


Reverse Opposite:

p-value:1e-20
log p-value:-4.691e+01
Information Content per bp:1.953
Number of Target Sequences with motif93.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets363.5 +/- 315.1bp
Average Position of motif in Background779.9 +/- 497.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GCTCTGCGCA--
NNGCNCTGCGCGGC

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTCTGCGCA------
NNTTTGCACACGGCCC

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTCTGCGCA
GCTCCG----

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCTCTGCGCA-----
GGGTGTGCCCAAAAGG

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCTCTGCGCA-----
---CTGCGCATGCGC

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCTCTGCGCA
NGCTN------

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCTCTGCGCA--
NAGCCCCGCCCCCN

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GCTCTGCGCA---
AATCGCACTGCATTCCG

MA0506.1_NRF1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GCTCTGCGCA-----
----TGCGCAGGCGC

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCTCTGCGCA-
GGCCCCGCCCCC