Information for motif3


Reverse Opposite:

p-value:1e-43
log p-value:-1.005e+02
Information Content per bp:1.614
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets454.4 +/- 304.1bp
Average Position of motif in Background15.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0596.1_SREBF2/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TATCACACCAGC
-ATCACCCCAT-

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TATCACACCAGC
-ATCACCCCAT-

MA0595.1_SREBF1/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TATCACACCAGC
-ATCACCCCAC-

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TATCACACCAGC
CNGTCACGCCAC-

PB0013.1_Eomes_1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TATCACACCAGC--
NNTTTTCACACCTTNNN

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TATCACACCAGC
KTTCACACCT--

PB0120.1_Foxj1_2/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TATCACACCAGC--
ATGTCACAACAACAC

MA0103.2_ZEB1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TATCACACCAGC
--CCTCACCTG-

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TATCACACCAGC
--TGACACCT--

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TATCACACCAGC-
---NNCACCTGNN